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    Why was Daniel so distraught after finding out about flight 815?
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    He knew that Charlotte would die, but due to memory loss off the island he couldn't remember the scene.

    How was Ray alive in this episode when he clearly saw his body in The Shape of Things to Come?
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    When Daniel did the experiment he showed that the island has a time difference from the rest of the world

    What was Daniel doing in Ann Arbor, Michigan?
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    Thanks to Michael for the heads up.

    Answered in the "The Variable", Daniel was in Ann Arbor doing research regarding The Swan station.

    Exactly what happened to Teresa?"
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    Thanks to Mindy for the heads up.

    In the Official Lost Audio Podcast from April 23, 2009, Damon and Carlton explain that Daniel's girlfriend, Teresa, was put into a "vegetative state" as a result of Daniel conducting experiments on her in his laboratory in Oxford (time stamp 18:36).

    Why is Daniel having such a difficult time remembering the three cards?
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    Thanks to GregDean and morelostthanever for the heads up.

    As seen in "The Variable," Daniel Faraday suffered memory loss following his experiments at Oxford. Eloise told Daniel that going to the Island would heal his memory problems and allow him to return to his research.

    Why does Daniel seem to recognize Ellie?
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    Thanks to Joel.

    Episode 514 "The Variable" confirms that Eloise ("Ellie") Hawking is Daniel Faraday's mother.

    How did Faraday warn Charlotte about not returning to the island?
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    Thanks to Joel for the following.

    As we saw in 514 "The Variable," Daniel saw young Charlotte on a swing set in 1978 and told her that she and her mom would need to evacuate the island when Dr. Chang gave the word.

    Where is Daniel?
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    Thanks to razzle dazzle.

    As seen in the final seconds of "Some Like it Hoth", Daniel has returned from Ann Arbor Michigan.

    How did Daniel wind up working with the Dharma Initiative?
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    As we now know Daniel, Sawyer, Juliet, Miles, Jin are now working with Dharma.

    Who is Daniels Mother?
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    We now know that Daniels mother is Mrs Hawkings

    Why must Desmond contact Daniels Mother?
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    Thanks to Razzle Dazzle.

    As seen in episode 5x05 "This Place is Death" it is confirm that Eloise Hawking knows how to stop the time traveling

    How did Daniel already have the Orchid symbol in his notebook?
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    Thanks to Brad for the heads up.

    He was working with the Dharma Initiative in the 70s and helped construct the station.

    What happened to Faraday and the people on his raft?
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    Thanks to Greg Dean

    As seen in "Because You Left", Daniel and the other people on the Zodiac (which retroactively includes Frogurt) were close enough to the radius of the Island (Daniel says this) to have come along with the Island when it moved, and they then join the rest of the Losties on the beach.